HPC for the Greek Health & Life Sciences Sector
Presentations
- EUROHPC/ EuroCC National Competence Center/ short presentation of activities (Ilias Hatzakis-Xenia Ziouvelou-Pavlos Sermpezis-Lena Kanellou)
- The EUROHPC JU Industry INFRAG (Zoe Cournia)
- CompBioMed: A Centre of Excellence in Computational Biomedicine (Andrea Townsend Nicholson)
- HPC use by the academic & research communities in Greece (Katerina Tzortzatou)
Experiences using HPC facilities for research on life sciences
- Success stories and practical considerations using HPC resources in academic and industrial use cases (Zoe Cournia)
- PediDose: A pediatric simulated dosimetry platform for clinical use (Panagiotis Papadimitroulas)
- HPC enables and accelerates data-driven solutions in biomarker discovery towards precision medicine. – Katerina Hatzaki, DUTH
Accessing HPC facilities (Dimitris Dellis)
HPC for life sciences: Key technologies to get you started
- Introduction to Workload Management (Lena Kanelou)
- Parallel Computing – An MPI Case Study (Lena Kanelou – Manolis Ploumidis)
- Why Accelerators? GPUs and their advantages (Manos Pavlidakis – Antonis Chazapis)
- Graph Analytics with Spark (Polyvios Pratikakis)
- Data Management (Dimitris Dellis)
Recordings
Welcome and Introduction – Angelos Bilas, FORTH
EUROHPC/ EuroCC National Competence Center/ short presentation of activities
Ilias Hatzakis, GRNET – Xenia Ziouvelou, Demokritos -Pavlos Sermpezis, AUTH – Lena Kanellou, FORTH
The EUROHPC JU Industry INFRAG – Zoe Cournia, EUROHPC JU – INFRAG
CompBioMed: A Centre of Excellence in Computational Biomedicine – Andrea Townsend-Nicholson, CompBioMed
HPC use by the academic & research communities in Greece – Katerina Tzortzatou, Demokritos
Questionnaire presentation and handout – Pavlos Sermpezis, AUTH
Success stories and practical considerations using HPC resources in academic and industrial use cases – Zoe Cournia, BioAcademy
PediDose: A pediatric simulated dosimetry platform for clinical use – Panagiotis Papadimitroulas, Bioemtech
HPC enables and accelerates data-driven solutions in biomarker discovery towards precision medicine. – Katerina Hatzaki, DUTH
Accessing HPC facilities – Dimitris Dellis, GRNET
HPC for life sciences: Key technologies to get you started – Introduction to Workload Management – Lena Kanellou, FORTH
HPC for life sciences: Key technologies to get you started – Parallel Computing – An MPI Case Study – Manolis Ploumidis, FORTH
HPC for life sciences: Key technologies to get you started – Why Accelerators? GPUs and their advantages – Manos Pavlidakis, FORTH
HPC for life sciences: Key technologies to get you started – Graph Analytics with Spark – Polyvios Pratikakis, FORTH
HPC for life sciences: Key technologies to get you started – Data Management – Dimitris Dellis, GRNET
